In: Chemistry
How the DNA was extracted from the strawberries, what was the purpose of the soap and salt?
Crushing the strawberries breaks open many of the strawberry cells, releasing the nuclei where the DNA is. The soap in the detergent or shampoo in the extraction buffer breaks down the fatty membranes of the cells, breaks open the nuclear membrane and releases the DNA into solution. The salt makes the DNA molecules stick together, and separate from the proteins that are also released from the cells.
Directions
1. Remove the green sepals from the strawberries.
2. Place strawberries into a Ziploc TM bag and seal shut.
3. Squish for a few minutes to completely squash the fruit.
4. Add 10 ml DNA Extraction Buffer (soapy salty water) and squish
for a few more minutes. Try not to make a lot of soap
bubbles.
5. Filter through a moistened paper towel set in a funnel, and
collect the liquid in a clear tube. Do not squeeze the paper towel.
Collect about 3 ml liquid.
6. Add 2 volumes ice cold isopropyl alcohol to the strawberry
liquid in the tube. Pour the isopropyl alcohol carefully down the
side of the tube so that it forms a separate layer on top of the
strawberry liquid.
7. Watch for about a minute. What do you see? You should see a
white fluffy cloud at the interface between the two liquids. That’s
DNA!
8. Spin and stir the coffee stirrer or transfer pipet in the tangle
of DNA, wrapping the DNA around the stirrer.
9. Pull out the stirrer and transfer the DNA to a piece of saran
wrap or clean tube. The fibers are thousands and millions of DNA
strands.
10. To view in a microscope, put the glob on a clean slide and
gently tease/stretch apart using 2 toothpicks or dissecting pins.
The fibers will be easier to see in the teased-apart area.
11. Rinse your funnel. Put the Ziploc TM bag and paper towel in the
garbage.
The soap helps to dissolve the phospholipid bilayers of the cell membrane and organelles. The salt is used to break up protein chains that bind around the nucleic acids. DNA is not soluble in ethanol. The colder the ethanol, the less soluble the DNA will be in it. Thus make sure to keep the ethanol in the freezer or on ice.
DNA extraction
buffer:
Makes 50mL (enough for 5 extractions)
1. 5 mL liquid dish washing detergent or shampoo
2. 0.75g salt
3. 45mL water