The database is called GenBank and is searchable for specific sequences. You will compare your sequence...

The database is called GenBank and is searchable for specific sequences. You will compare your sequence to the database, find the closest matches and create a phylogenetic tree.

Please help with phylogenetic tree and a table using a NCBI (Blast):

the sequence is:

ATGACTAACATCCGTAAATCCCACCCACTAATCAAAATTATCAACCACTCATTCATCGATCTGCCCACCC

CATCAAACATCTCAGCCTGGTGAAACTTTGGCTCCCTGCTAGGAATCTGCTTAATCTTACAAATTCTAAC

CGGACTATTCCTTGCCATACACTACACACCAGACACAATAACTGCCTTCTCATCTGTCGCCCATATCTGT

CGAGACGTGAATTACGGCTGAATTATCCGCTATCTCCATGCCAACGGAGCATCCATATCCTTTATCTGCC

TATTCATCCACGTAGGACGCGGTATCTATTACGGATCATATACCTTCCTAGAAACCTGAAACATCGGAGT

TATCTTACTATTCACTCTAATAGCCACCGCATTCATAGGCTACGTCCTACCATGAGGCCAAATATCCTTC

Expert Solution

gladiator answered 2 years ago

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Genome sequences are useful to search DNA databases. Proteomics on the other hand is searchable protein...

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Find sequences that satisfy the following or explain why no such sequence exists: a) A sequence...

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Copy three sequences and perform a multiple sequence alignment on them. In your alignment, include B73 and one strain containing the insertion and one that does not. >B73 CGCAACACATGTTAGCACAAGAGTTGCAGGAACACTGTAAGTGAGCGTCTGCTTTT ATATTTTTTCGATTTCTTCTCTTATTGTTTCTCGAGCGCCTAGAGAAGCTCGTTCTTG TACCATCCTTTTCATTTTAGTTGGATGATACTCCCTCCGTCTCATGATATAAGGCGTA ACCACTTTTTATTCTTGTCCCGCAATATAAGGCGTGCTCTCTCTATGCATACGTATAT CGATGCAGTGGTATAGAGACAATTAAATGTATTTCTTGGTCTTTGAACCAGAGGTGG TTACGCCTTATATACTGGGACGGAGGGAGTACTTGTTAAATTTTAAGAAATGTCCAG AGAGTTCAGCAAAGCAATAACATTTGTACTTACCTGTATATGATATATACATGTGGC CTATGAATACTTTTTTCAGCTTTGCTTACTCCGTTTTAATTGGCAGGGGTTATTTGGC TCCTGAGTATGCTATTCGAGGACAGGTGACACGCAAATCAGATGTGTACAGCTTTG GCGTGCTGCTTCTGGAAATTGTTTGCGGGAGATCAAACAGCGATACAAGATTAGCA TACGGAGATCAGATACTCCTCGAAAA Sequence with insertion >Tzi25 CGCAACACATGTTAGCACAAGAGTTGCAGGAACACTGTAAGTGAGCGTCTGCTTTT ATATTTTTTCGATTTCTTCTCTTATTGTTTCTCGAGCGCCTAGAGAAGCTCGTTCTTG TACCATCCTTTTCATTTTAGTTGGATGATACTCCCTCCGTCTCATGATATAAGGCGTA ACCACTTTTTATTCTTGTCCCGCAATATAAGGCGTGCTCTCTCTATGCATACGTATAT CGATGCAGTGGTATAGAGACAATTAAATGTATTTCTTGGTCTTTGAACCAGAGGTGG TTACGCCTTATATACTGGGACGGAGGGAGTACTTGTTAAATTTTAAGAAATGTCCAG AGAGTTCAGCAAAGCAATAACATTTGTACTTACCTGTATATGATATATACATGTGGC CTATGAATACTTTTTTCAGCTTTGCTTACTCCGTTTTAATTGGCAGGGGTTATTTGGC TCCTGAGTATGCTATTCGAGGACAGGTGACACGCAAATCAGATGTGTACAGCTTTG GCGTGCTGCTTCTGGAAATTGTTTGCGGGAGATCAAACAGCGATACAAGATTAGCA TACGGAGATCAGATACTCCTCGAAAAGGTCAAAATGACGCT Sequence without insertion: >A679 CGCAACACATGTTAGCACAAGAGTTGCAGGAACACTGTAAGTGAGCGTCTGCTTTT ATATTTTTCGATTTCTTCTCTTATTTTTTTCTCGAGTGCCTAGAGAAGCTCGTTCTTGT ACCATCCTTTTCATTTTAGTTGGATGATACTTGTTAAATTTAAGAAATGTCCAGAGAG TTCCGCAAAGCAATAACATCTGTACTTACCTGTATATGATATATACATGTGGCCTAT GAATACTTTTTTGAGCTTTGCTTACTCCGTTTTAATTGGCAGGGGTTATTTGGCTCCT GAGTATGCTATTCGAGGACAGGTGACACGCAAATCAGATGTGTACAGCTTTGGCGT GCTGCTTCTGGAAATTGTTTGCGGGAGATCAAACAGCGATACAAGATTAGCATACG GAGATCAGATACTCCTCGAAAAGGTCAGATGACGCT What does this insertion represent (i.e. what type of polymorphism is this and explain

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