In: Biology
image.png 1.Researchers discovered that juniferdin, a plant‐derived compound, that effects proteins secretion in mammalian cells. They also found that the target of this drug is Protein Disulfide Isomerase (PDI). In the experiment shown to the right, cultured pancreatic β‐cells were treated with juniferdin and protein lysates from juniferdin‐treated and non‐treated cells were isolated and compared using immunoblot analysis. The blots shown to the right were probed with antibodies against PDI (57kDa) and actin (43 kDa), or Pro‐Insulin (9.8 kDa) and actin. 4a. Given that approximately the same amount of protein was loaded in each lane (as evidenced by similar actin levels), why are PDI levels the same but pro‐insulin levels are reduced in untreated cells?
image.png 4b. The same protein lysates were also probed with antibodies against Ire1 and Hac1 (also known as XbpP1), along with antiactin. Which blot (right or left) was labeled with anti‐Ire1? Which blot (right or left) was labeled with Hac1 (Xbp1)? How do you explain the presence of a ~30 kDa band in juniferdintreated cells but not in untreated cells in the blot on the right? before dialysis after dialysis 1 + 2 ‐1 + 3 ‐ + 2 + 3 ‐transcriptional activitysamples mixed 4c. Immunocytochemistry and fluorescence microscopy analysis was carried out using the antibody utilized in blot on the right (in question 4b) and detection was achieved using a secondary antibody labeled with rhodamine (red). Since juniferdin specifically affects PDI, a resident rough ER protein, how do you explain the localization of the signal in the nucleus?
PDI-KD enhances proinsulin
export from ER. A, at 72 h after transfection with either
scrambled or ERO1β (panels at left) or PDI siRNA duplexes
(panels at right) (40 nm), INS1 cells were pulse-labeled
for 15 min with [35S]Cys/Met and lysed in SDS buffer with 10 mm
NEM. Lysates were immunoprecipitated in duplicate with anti-insulin
and analyzed by Tris-Tricine-urea-SDS-PAGE under nonreduced or
reduced (100 mm DTT) conditions. These data were replicated in
three experiments. Recovery of the native proinsulin disulfide
isomer (N) divided by total proinsulin recovery under
reduced conditions (P) was quantified in these experiments
with mean ± S.D. shown below; the asterisks signify
p < 0.05. B, INS1 cells treated with siRNA
duplexes (100 nm) designed for knockdown of the luciferase mRNA (a
negative control, C1), GFP mRNA (negative control,
C2), or PDI-KD were lysed at 72 h after siRNA
transfection. Upper eight set of bands: Western blotting
for the antigens indicated, normalized to protein (10 or 20 μg,
depending on antigen), with γ-tubulin serving as a loading control.
BiP and GRP94 were identified with anti-KDEL antibodies. From four
such experiments, no significant differences were observed in
PDI-KD cells except for the PDI protein itself. Bottom
row: XBP1 mRNA was measured by RT-PCR using primers that
amplify both unspliced (u) and spliced (s) forms
(19). As a positive control for ER stress, cells were treated with
thapsigargin (downward arrowhead in first lane: 1
μm for 3 h). From three such experiments, no significant
differences were observed in PDI-KD cells. C, at 72 h
after transfection with either scrambled (Con) or PDI
siRNA (KD) duplexes (100 nm), INS1 cells were
pulse-labeled for 20 min with [35S]Cys/Met and either lysed
immediately or chased for 1 h, and both media (M) and cell
lysates (C) were collected. Samples were
immunoprecipitated with anti-insulin and analyzed by reducing
Tris-Tricine-urea-SDS-PAGE. Note that two-thirds of the
radioactivity of insulin is lost upon reducing SDS-PAGE because the
A-chain is not recovered. Upper panel: Western blotting of
PDI in the cells used in this experiment. D, at 48 h after
transfection of INS1 cells with either scrambled (light
bars) or PDI siRNA duplexes (dark bars), the media
were changed, and fresh growth media (11 mm glucose) were applied
and collected after an additional 24 h. At that time, the cells
were lysed, and total insulin (i.e. insulin plus
proinsulin) in both cell lysates and media was measured by RIA. The
data are the mean of three experiments with six independent
replicates; control values were set to 100%. When comparing control
versus PDI-KD, either cells or media, the
asterisks signify p < 0.05. E, Min6
cells were transiently transfected to express empty vector
(Control), FLAG-PDI-AGHA,AGHA′ (PDI-DEAD),
FLAG-WT-PDI, or FLAG-PDI-CGHA (PDI-TRAP). At 72 h after
transfection, the Min6 cells were pulse-labeled for 20 min with
[35S]Cys/Met and lysed in SDS-containing lysis buffer with 15 mm
NEM. The lysates were immunoprecipitated with either anti-FLAG or
anti-insulin as indicated. The anti-FLAG immunoprecipitates
(IP) were analyzed on the same SDS gel with
phosphorimaging (i.e. identical exposure) under
nonreducing or reducing conditions as indicated; the anti-insulin
immunoprecipitates come from an independent gel analysis of the
same samples. The positions of FLAG-PDI, PDI-proinsulin adduct, and
newly synthesized proinsulin (under reducing conditions) are
indicated.