Question

In: Chemistry

A protein assay requires the reaction of the protein solution with a protein-binding dye for one...

A protein assay requires the reaction of the protein solution with a protein-binding dye for one minute, followed by measuring the absorbance of the protein-dye complex at 505 nm. The absorbance data for four standard protein solutions and the blank is provided in the table below. The absorbance of each solution was measured three times. Construct a calibration curve using the data in the table, and find the slope (m), intercept (b), and their respective standard deviations using the method of least squares. Note that the calibration curve will be created from absorbance values corrected for the absorbance of the blank and not the raw data in the table (including individual blank values). When creating the calibration curve, do not use the average absorbance at each protein concentration. Instead, use each data point separately, meaning there will be three data points at each protein concentration, for a total of 15 points (including each individual blank value).

replicate 1 replicate 2 replicate 3
blank 0.0332 0.0331 0.0335
0.10 g/dL 0.1002 0.0999 0.998
0.20 g/dL 0.233 0.233 0.233
0.50 g/dL 0.532 0.534 0.533
1.00 g/dL 1.032 1.033 1.031

m= 1.012 +/- ?

b= ? +/- ?

Calculate the concentration and uncertainity of a protein solution that produced an averge absorption of 0.470 when measured three times.

number = ? +/- ?

Solutions

Expert Solution

Answer:

The following procedure can be used for constructing a calibration curve:

Step 1 Prepare known samples of analyte covering a range of concentrations expected for unknowns. Measure the response of the analytical procedure to these standards to generate data like the left half of Table-1.

Step 2 Subtract the average absorbance (0.0993) of the blank* samples from each measured absorbance to obtain corrected absorbance. The blank measures the response of the procedure when no protein is present.

Step 3 Make a graph of corrected absorbance versus quantity of protein analyzed (Figure-2). Use the least-squares procedure to find the best straight line through the linear portion of the data, up to and including 20.0 microgram of protein (14 points, including the 3 corrected blanks, in the shaded portion of Table-1). Find the slope and intercept and uncertainties with Equations A, B, C D, E & F. The results arem = 0.016 30 sm = 0.000 22 sy = 0.0059 b = 0.0047 sb = 0.0026 The equation of the linear calibration line is


Related Solutions

The Bradford Assay is one of the most popular protein assays, but it is not the...
The Bradford Assay is one of the most popular protein assays, but it is not the only one. Briefly describe any of the alternative assays that are available. If you were setting up your own lab, which would you prefer to use? Briefly state why.
In Bradford Assay experiment, we diluted the protein solution and end of the experiment we obtained...
In Bradford Assay experiment, we diluted the protein solution and end of the experiment we obtained more protein than we expected. What can be possible problems during perform the experiment?
Discuss protein binding, what it means, what are the implications of a drug protein binding percentage...
Discuss protein binding, what it means, what are the implications of a drug protein binding percentage and how the protein binding impacts how drugs may interact with each other and the subsequent effect on the patient (provide 2 explicit examples). And, then explain what will happen if the patient is malnourished. what are ED50 , LD50, TD50: and explain in detail why the matter. Please give 2 examples of each.
What are the experimental limitations of this binding assay? List ways to fix them
What are the experimental limitations of this binding assay? List ways to fix them
Why is the Bradford Assay a superior method for determining protein concentration compared to other protein...
Why is the Bradford Assay a superior method for determining protein concentration compared to other protein concentration methods such as taking an absorbance at 280 nm? Why might your values be different from those of the manufacturer?
A biochemist replaces the DNA‐binding domain of the yeast Gal4 protein with the DNA‐binding domain of...
A biochemist replaces the DNA‐binding domain of the yeast Gal4 protein with the DNA‐binding domain of the Lac repressor and finds that the engineered protein no longer regulates transcription of the GAL genes in yeast. A. Draw a diagram of the different functional domains you would expect to find in the Gal4 protein and in the engineered protein. B. What might be done to the DNA‐binding site recognised by this chimeric protein to make it functional in activating transcription of...
2. Protein-DNA binding a) List the types of interactions that are involved between a protein that...
2. Protein-DNA binding a) List the types of interactions that are involved between a protein that binds DNA non-specifically and DNA. b) List two proteins that bind to DNA non-specifically. c) List the types of interactions usually involved between a sequence-specific DNA binding protein and DNA. d) List two proteins that bind DNA specifically. e) What is the difference between non-specific and specific protein binding to DNA?
Upon binding of a ligand, G-protein-coupled receptors do which of the following? Select one: a. The...
Upon binding of a ligand, G-protein-coupled receptors do which of the following? Select one: a. The G-protein exchanges a GDP for a GTP, and the alpha subunit detaches from the beta/gamma complex b. They dimerize, autophosphorylate, and trigger a cascade in intracellular signal transduction/phosphorylation c. They migrate to the nucleus to activate/repress specific genes d. They get internalized and start producing cAMP e. They induce apoptosis
What assay uses the fact that activators can be separated into DNA binding and activating domains?...
What assay uses the fact that activators can be separated into DNA binding and activating domains? What information do you gain from this assay? Describe briefly how to perform this assay.
What is the oxygen-binding protein in red blood cells?
What is the oxygen-binding protein in red blood cells?
ADVERTISEMENT
ADVERTISEMENT
ADVERTISEMENT