Using the INTERRNA database (mfrlab.org/interrna/); how many T-loop base motifs (patterns) can be found in the...

Using the INTERRNA database (mfrlab.org/interrna/); how many T-loop base motifs (patterns) can be found in the structure of the ribosomal RNA subunit with the PDB code 1ffk? *

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The InterRNA database consists of base interactions in RNA structures that were annotated using the computer programs NASSAM and COGNAC. Also help classification is provided for the loops

Open the INNTERNA website using the given URL.
Select T-loop in Search Database by Motif Type.
Enter PDB ID 1ffk and the result is given below.

It suggest that there are 6 T-loop base motifs in the structure of the ribosomal RNA subunit.

gladiator answered 1 year ago

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