In: Chemistry
1. Compare and contrast the point of entry for NADH-derived electrons into the electron-transport chain on the matrix side vs the cytosolic side of the inner mitochondrial membrane. Which of these entry points provides the most energy? Why?
Ans. Cytoplasmic NADH (from glycolysis), when transferred to mitochondria through specific carrier (say, Glycerol-3-phospate shuttle), produces only 1.5 ATP when compared to 2.5 ATP from mitochondrial NADH (from TCA cycle).
The reaction occurring at Glycerol-3-phosphate shuttle is-
NAHD (cytosol) + Enzyme-FAD (Mitochondria) <------------>
NAD+ (cytosol) + Enzyme-FADH2 (mitochondria)
Note that the electron from cytosolic NADH is transferred to enzyme-bound FAD during the transport through Glycerol-3-phophate shuttle. The resultant FADH2 is oxidized at complex II of ETC (whereas NADH is oxidized at complex I) which transports NO protons from mitochondrial matrix to intermembrane space. Therefore, oxidization of FADH2 at complex II produces lesser amount of ATP (1.5 ATP per FADH2 compared to 2.5 ATP per NADH) because it generates lesser amount of proton gradient across the inner mitochondrial membrane.
# So, the amount of ATP derived from NDAH depends on compartmentalization in the cell and source of NADH –
I. If NADH is produced in mitochondria, say during TCA cycle, it is directly oxidized at complex I of ETC. And, it produces 2.5 ATP per NADH.
II. If NADH in produced in cytosol (say, during glycolysis) and enters mitochondria through Glycerol-3-phosphate shuttle in form of FADH2, it would be oxidized at complex II and would produce 1.5 ATP per NADH.
III. In some cases, where no such protein is involved (for example, in prokaryotes that lack mitochondria- all processes occur in cytoplasm), cytoplasmic NADH also produces 2.5 ATP similar to matric NADH.